Publicaciones

@article{navarro2023balancer,

title = {BALANCER: bandwidth allocation and cache partitioning for multicore processors},

author = {Agustín Navarro-Torres and Jesús Alastruey-Benedé and Pablo Ibáñez and Víctor Viñals-Yúfera},

url = {https://doi.org/10.1007/s11227-023-05070-0},

doi = {10.1007/s11227-023-05070-0},

year  = {2023},

date = {2023-01-01},

urldate = {2023-01-01},

journal = {The Journal of Supercomputing},

pages = {1--25},

publisher = {Springer},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{DBLP:journals/tcbb/LangaritaASIAM22,

title = {Compressed Sparse FM-Index: Fast Sequence Alignment Using Large K-Steps},

author = {Rubén Langarita and Adrià Armejach and Javier Setoain and Pablo Ibáñez-Marín and Jesús Alastruey-Benedé and Miquel Moretó},

url = {https://doi.org/10.1109/TCBB.2020.3000253},

doi = {10.1109/TCBB.2020.3000253},

year  = {2022},

date = {2022-01-01},

journal = {IEEE ACM Trans. Comput. Biol. Bioinform.},

volume = {19},

number = {1},

pages = {355--368},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{DBLP:journals/jpdc/ValeroTGGEAMRI21,

title = {A learning experience toward the understanding of abstraction-level 

 interactions in parallel applications},

author = {Alejandro Valero and Ruben Gran Tejero and Darío Suárez Gracia and Emanuel A. Georgescu and Joaquín Ezpeleta and Pedro Álvarez and Adolfo Muñoz and Luis M. Ramos and Pablo Ibáñez},

url = {https://doi.org/10.1016/j.jpdc.2021.05.008},

doi = {10.1016/j.jpdc.2021.05.008},

year  = {2021},

date = {2021-01-01},

journal = {J. Parallel Distributed Comput.},

volume = {156},

pages = {38--52},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{DBLP:journals/tjs/DiazIMVL21,

title = {Near-optimal replacement policies for shared caches in multicore processors},

author = {Javier Díaz and Pablo Ibáñez and Teresa Monreal and Víctor Viñals and José M. Llabería},

url = {https://doi.org/10.1007/s11227-021-03736-1},

doi = {10.1007/s11227-021-03736-1},

year  = {2021},

date = {2021-01-01},

journal = {J. Supercomput.},

volume = {77},

number = {10},

pages = {11756--11785},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{alcolea2021fpga,

title = {FPGA Accelerator for Gradient Boosting Decision Trees},

author = {Adrián Alcolea and Javier Resano},

year  = {2021},

date = {2021-01-01},

journal = {Electronics},

volume = {10},

number = {3},

pages = {314},

publisher = {Multidisciplinary Digital Publishing Institute},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{diaz2021near,

title = {Near-optimal replacement policies for shared caches in multicore processors},

author = {Javier Díaz and Pablo Ibáñez and Teresa Monreal and Víctor Viñals and José M Llabería},

year  = {2021},

date = {2021-01-01},

journal = {The Journal of Supercomputing},

pages = {1--30},

publisher = {Springer},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{lamela2021offchip,

title = {Off-chip prefetching based on Hidden Markov Model for non-volatile memory architectures},

author = {Adrián Lamela and Óscar G Ossorio and Guillermo Vinuesa and Benjamín Sahelices},

url = {https://doi.org/10.1371/journal.pone.0257047},

doi = {10.1371/journal.pone.0257047},

year  = {2021},

date = {2021-01-01},

journal = {PLOS ONE},

volume = {16},

number = {9},

pages = {1-23},

publisher = {Public Library of Science},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{DBLP:journals/jsa/SegarraTV21,

title = {A generic framework to integrate data caches in the WCET analysis of real-time systems},

author = {Juan Segarra and Ruben Gran Tejero and Víctor Viñals},

url = {https://doi.org/10.1016/j.sysarc.2021.102304},

doi = {10.1016/j.sysarc.2021.102304},

year  = {2021},

date = {2021-01-01},

urldate = {2021-01-01},

journal = {J. Syst. Archit.},

volume = {120},

pages = {102304},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{DBLP:journals/tcbb/HerruzoGIYAP20,

title = {Accelerating Sequence Alignments Based on FM-Index Using the Intel 

 KNL Processor},

author = {Jose Manuel Herruzo and Sonia González-Navarro and Pablo Ibáñez-Marín and Víctor Viñals Yúfera and Jesús Alastruey-Benedé and Oscar G. Plata},

url = {https://doi.org/10.1109/TCBB.2018.2884701},

doi = {10.1109/TCBB.2018.2884701},

year  = {2020},

date = {2020-01-01},

journal = {IEEE ACM Trans. Comput. Biol. Bioinform.},

volume = {17},

number = {4},

pages = {1093--1104},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{biology9080207,

title = {Expanding the Limits of Computer-Assisted Sperm Analysis through the Development of Open Software},

author = {Jesús Yániz and Carlos Alquézar-Baeta and Jorge Yagüe-Martínez and Jesús Alastruey-Benedé and Inmaculada Palacín and Sergii Boryshpolets and Vitaliy Kholodnyy and Hermes Gadêlha and Rosaura Pérez-Pe},

url = {https://www.mdpi.com/2079-7737/9/8/207},

doi = {10.3390/biology9080207},

issn = {2079-7737},

year  = {2020},

date = {2020-01-01},

urldate = {2020-01-01},

journal = {Biology},

volume = {9},

number = {8},

abstract = {Computer assisted sperm analysis (CASA) systems can reduce errors occurring in manual analysis. However, commercial CASA systems are frequently not applicable at the forefront of challenging research endeavors. The development of open source software may offer important solutions for researchers working in related areas. Here, we present an example of this, with the development of three new modules for the OpenCASA software (hosted at Github). The first is the Chemotactic Sperm Accumulation Module, a powerful tool for studying sperm chemotactic behavior, analyzing the sperm accumulation in the direct vicinity of the stimuli. This module was validated by comparing fish sperm accumulation, with or without the influence of an attractant. The analysis clearly indicated cell accumulation in the treatment group, while the distribution of sperm was random in the control group. The second is the Sperm Functionality Module, based on the ability to recognize five sperm subpopulations according to their fluorescence patterns associated with the plasma membrane and acrosomal status. The last module is the Sperm Concentration Module, which expands the utilities of OpenCASA. These last two modules were validated, using bull sperm, by comparing them with visual counting by an observer. A high level of correlation was achieved in almost all the data, and a good agreement between both methods was obtained. With these newly developed modules, OpenCASA is consolidated as a powerful free and open-source tool that allows different aspects of sperm quality to be evaluated, with many potential applications for researchers.},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{moreno2020analysis,

title = {Analysis of a Pipelined Architecture for Sparse DNNs on Embedded Systems},

author = {Adrián Alcolea Moreno and Javier Olivito and Javier Resano and Hortensia Mecha},

year  = {2020},

date = {2020-01-01},

journal = {IEEE Transactions on Very Large Scale Integration (VLSI) Systems},

volume = {28},

number = {9},

pages = {1993--2003},

publisher = {IEEE},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{alcolea2020inference,

title = {Inference in supervised spectral classifiers for on-board hyperspectral imaging: An overview},

author = {Adrián Alcolea and Mercedes E Paoletti and Juan M Haut and Javier Resano and Antonio Plaza},

year  = {2020},

date = {2020-01-01},

journal = {Remote Sensing},

volume = {12},

number = {3},

pages = {534},

publisher = {Multidisciplinary Digital Publishing Institute},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{haut2020gpu,

title = {GPU-Friendly Neural Networks for Remote Sensing Scene Classification},

author = {Juan M Haut and Adrian Alcolea and Mercedes E Paoletti and Javier Plaza and Javier Resano and Antonio Plaza},

year  = {2020},

date = {2020-01-01},

journal = {IEEE Geoscience and Remote Sensing Letters},

publisher = {IEEE},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{pedro2020ideal,

title = {Ideal and Predictable Hit Ratio for Matrix Transposition in Data Caches},

author = {Alba Pedro-Zapater and Clemente Rodríguez and Juan Segarra and Rubén Gran Tejero and Víctor Viñals-Yúfera},

year  = {2020},

date = {2020-01-01},

journal = {Mathematics},

volume = {8},

number = {2},

pages = {184},

publisher = {Multidisciplinary Digital Publishing Institute},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{segarra2020automatic,

title = {Automatic Safe Data Reuse Detection for the WCET Analysis of Systems with Data Caches},

author = {Juan Segarra and Jordi Cortadella and Rubén Gran Tejero and Victor Viñals},

year  = {2020},

date = {2020-01-01},

journal = {IEEE Access},

publisher = {IEEE},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{pedro2020reducing,

title = {Reducing the WCET and analysis time of systems with simple lockable instruction caches},

author = {Alba Pedro-Zapater and Juan Segarra and Rubén Gran Tejero and Víctor Viñals and Clemente Rodríguez},

year  = {2020},

date = {2020-01-01},

journal = {Plos one},

volume = {15},

number = {3},

pages = {e0229980},

publisher = {Public Library of Science San Francisco, CA USA},

keywords = {},

pubstate = {published},

tppubtype = {article}

}